SOPHiA DDM™ Lymphoma Solution (LYS)
Vendor: SOPHiA GENETICS
SKU: BS0116ILLRSMY10-16
In stock
The SOPHiA DDM™ Lymphoma Solution (LYS) is a comprehensive capture-based application designed to detect and analyze genomic alterations on 54 genes associated with various B- and T-cell lymphomas.
Sample-to-report bundle: capture-based target enrichment and library preparation kit combined with the analytical capabilities of the SOPHiA DDM™ Platform.
Specifications
| Gene content | 54 genes |
|---|---|
| Key biomarkers | CREBBP, EP300, EZH2, MEF2B, MYD88, MYC, BRAF |
| Diseases covered | B- and T-cell lymphomas such as diffuse large B-cell, follicular, mantle cell, and Burkitt lymphomas |
| Detected variants | SNVs Indels Gene amplifications (47 genes) |
| Sample type | FFPE, blood, and bone marrow |
| Starting material | 50 ng DNA |
| Target region size | 118 Kb |
| Sequencer compatibility | Illumina MiSeq® and NextSeq® |
| Library preparation time | 1.5 days |
| Analysis time from FASTQ | 4 hours |
| Regulatory status | Research Use Only (RUO) |
Key Features
Gain a complete view of Lymphoid Malignancies – Go from sample to report with SOPHiA DDM™ for Lymphoid Malignancies. Leverage our flexible platform that offers a comprehensive range of guideline-driven, ready-to-use, and customizable next-generation sequencing (NGS)-based applications to enhance your genomic profiling capabilities.
Workflow
Charting the course to solve lymphoid cases – Streamline your analysis with an accurate and adaptable workflow.
A wave of insights for every laboratory – Streamline your blood cancer analysis workflow from sample to comprehensive, customized report.
- Flexible and scalable library preparation – Rely on robust sequencing across multiple applications using one universal and automated protocol.
- Accurate variant detection and annotation – Precisely detect challenging genomic variants thanks to the power of our proprietary algorithms.
- Customizable reporting – Quickly prepare comprehensive reports tailored to your needs.
Analytics
Turning data into insights—it’s in our blood – Gain deeper insights into lymphoid malignancies by accurately assessing even the most challenging molecular biomarkers with the advanced power of SOPHiA DDM™'s proprietary algorithms.
- Sensitive SNV and Indel detection – Accurately identify single nucleotide variants (SNVs) and small insertions/deletions (Indels) in lymphoid malignancies, even in challenging samples. PEPPER™’s sophisticated algorithm differentiate true signal from noise, providing you with reliable results to guide your decisions.
- Accurate CNV calling – Gain crucial insights into the genomic alterations driving lymphoid malignancies with MUSKAT™. Our copy number variation (CNV) calling algorithm adapts to experimental conditions and performs double normalization to call CNVs missed by other tools.
- Robust variant annotation – Confidently interpret the significance of genomic variants in lymphoid malignancies with MOKA™. Our robust annotation algorithm draws from curated databases and uses de novo analytics to provide insights on the likely effects and pathogenicity of genomic variants.
- Explore IGH and IGL rearrangement – SOPHiA GENETICS worked with IDIBAPS to enable IgCaller companion software to be used with SOPHiA DDM™ Community CLL Clonality Solution.
Ordering Information
| Product code | Reactions |
|---|---|
| BS0116ILLRSMY10-16 | 16 |
| BS0116ILLRSMY10-32 | 32 |
For Research Use Only. Not for use in diagnostic procedures.
Specifications
- Assay time 4 hours
- Cancer type B- and T-cell lymphomas such as diffuse large B-cell, follicular, mantle cell, and Burkitt lymphomas
- Content specifications 54 genes
- Hands on time 1.5 days
- Input quantity 50 ng DNA
- Instruments Illumina MiSeq® and NextSeq®
- Pack size 16, 32 reactions
- Regulations Research Use Only (RUO)
- Specialized sample types FFPE, blood, and bone marrow
- Sub category Lymphoid
- Variant class SNVs; Indels; Gene amplifications (47 genes)
links and documants
- Source url Click here
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SOPHiA DDM™ Lymphoma Solution (LYS)
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